Allow `git_index_read` to handle reading existing indexes with
illegal entries.  Allow the low-level `git_index_add` to add
properly formed `git_index_entry`s even if they contain paths
that would be illegal for the current filesystem (eg, `AUX`).
Continue to disallow `git_index_add_bypath` from adding entries
that are illegal universally illegal (eg, `.git`, `foo/../bar`).