repository: Change ownership semantics
The ownership semantics have been changed all over the library to be consistent. There are no more "borrowed" or duplicated references. Main changes: - `git_repository_open2` and `3` have been dropped. - Added setters and getters to hotswap all the repository owned objects: `git_repository_index` `git_repository_set_index` `git_repository_odb` `git_repository_set_odb` `git_repository_config` `git_repository_set_config` `git_repository_workdir` `git_repository_set_workdir` Now working directories/index files/ODBs and so on can be hot-swapped after creating a repository and between operations. - All these objects now have proper ownership semantics with refcounting: they all require freeing after they are no longer needed (the repository always keeps its internal reference). - Repository open and initialization has been updated to keep in mind the configuration files. Bare repositories are now always detected, and a default config file is created on init. - All the tests affected by these changes have been dropped from the old test suite and ported to the new one.
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tests-clay/config/add.c
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tests-clay/config/read.c
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tests-clay/config/write.c
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tests-clay/odb/loose.c
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tests-clay/odb/packed.c
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tests-clay/odb/sorting.c
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tests-clay/repo/getters.c
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tests-clay/repo/init.c
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tests-clay/repo/open.c
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tests/t02-objread.c
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tests/t15-config.c
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tests/t16-remotes.c
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