refdb: create references in commondir
References for a repository are usually created inside of its gitdir. When using worktrees, though, these references are not to be created inside the worktree gitdir, but instead inside the gitdir of its parent repository, which is the commondir. Like this, branches will still be available after the worktree itself has been deleted. The filesystem refdb currently still creates new references inside of the gitdir. Fix this and have it create references in commondir.
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