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treebuilder
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Huang Di
treebuilder
Commits
aa3cfc42
Commit
aa3cfc42
authored
Jul 11, 2023
by
Huang Di
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fix s1 s2 display bug
parent
36da3345
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4 deletions
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treebuilder.py
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treebuilder.py
View file @
aa3cfc42
...
...
@@ -532,7 +532,7 @@ class TreeBuilder(object):
for
gene_flow
,
m1s
in
propotion
.
items
():
s1
,
tar
=
gene_flow
for
m1
in
m1s
:
s
1
,
mix
,
m_pd
=
m1
s
2
,
mix
,
m_pd
=
m1
# print(s2, tar, s1, mix, m_pd)
print
(
mat
.
format
(
s2
,
tar
,
s1
,
mix
,
m_pd
))
if
(
s1
,
tar
)
not
in
gene_flows_checked_by_propotion
:
...
...
@@ -756,9 +756,9 @@ class TreeBuilder(object):
if
print_gene_flow
:
for
l1
,
l2
in
self
.
gene_flow
:
options
.
append
(
"
%
s ->
%
s [color=red]"
%
(
l1
,
l2
))
print
(
self
.
populations
)
print
(
self
.
relations
)
print
(
RenderTree
(
self
.
root
))
#
print(self.populations)
#
print(self.relations)
#
print(RenderTree(self.root))
return
DotExporter
(
self
.
root
,
options
=
options
)
def
export_dot
(
self
,
filename
,
print_gene_flow
=
True
):
...
...
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