Fix up checkout file contents checks
This fixes of the file contents checks in checkout to give slightly better error messages by directly calling the underlying clar assertions so the file and line number of the top level call can be reported correctly, and renames the helpers to not start with "test_" since that is kind of reserved by clar. This also enables some of the CRLF tests on all platforms that were previously Windows only (by pushing a check of the native line endings into the test body).
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